Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAEL--TRMGVVNSAGAVDP----------RVAQWITTVCRATQWL--DLRFVSGP--GDLLRGMVAR---RSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARA-DEQIRNGA----------PLAEVLEF-LGVPPSARPLVESVFDG--RRTYVEIVAGEHRDGHRVTTEVGVSIID-TPH-GRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWFPDQPLTRDFDEDAATHREPVLQRRTQKA---------------- |
2CY7 Chain:A ((5-377)) | ------TLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEGCFIPDESFHCQHPP-----CRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLPMFELVEQQPDVLNLSLDSSDVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87175 for 2127 contacts (-41.0/contact) +
2D Compatibility (PS) -29503 + (NN) -8127 + (LL) 164
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -135541.0 ( -63.72 by residue)
QMean score : 0.112
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