Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------ESNYISVREEYPDIDSEVRAILLSHAQNG--ITISSIKSEYRKLTGNPFPLHDNVTDFLL--TIPNVTAECSESGKRIFNLKAS----------------
2FSD Chain:A ((4-113))
DIPWTDLNRASGVGSTGILQARIINGVIYVRGNSIPVPNVAPNFIVPVGTFPPAF----GTNLPQFDSSGTFYSHGNLSLSLINMSPSGIAVGNPNNTSMNGKTISFALSAPLL
General information:
TITO was launched using:
RESULT:
Template:
2FSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17217 for 428 contacts (-40.2/contact) +
2D Compatibility (PS) -8042 + (NN) 166 + (LL) 392
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -27251.0 ( -63.67 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_2FSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSD-query.scw
PDB file :
Tito_Scwrl_2FSD.pdb
: