Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------MNIKKLFSIFTLVILVFATACTNKSEK------ATVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVS--LNNKRNE-------WNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGMG-VGKVDLDISGNYKNNVKVNIEGGVGEATVYLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK----------------------------------------------- |
| 1MIQ Chain:B ((76-327)) | TEHLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG----TVKGFFSKDLVTLGH---LSMPYKFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGT--TTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 109323 for 1425 contacts (76.7/contact) +
2D Compatibility (PS) -20482 + (NN) 11223 + (LL) 424
1D Compatibility (HY) 2000 + (ID) 650
Total energy: 101838.0 ( 71.47 by residue)
QMean score : -0.046
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