Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSETTIILTDDGVTDIGMARNTIHQMVGLVDDLVASEATASQLREALYAALARGLGFQASVGQSSPLLLRRSVLLSLRGLARRLARIEADALTDDIQPRDIVLSAKELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG-
1Q60 Chain:A ((1-99))
GSSG-------------------------------SSGLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTF-----------GIPRLEKILRNKAKIKFIIKKPEMFETAIKESSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1Q60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37947 for 655 contacts (-57.9/contact) +
2D Compatibility (PS) -11179 + (NN) -7921 + (LL) 2992
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -59955.0 ( -91.53 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1Q60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q60-query.scw
PDB file :
Tito_Scwrl_1Q60.pdb
: