Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGK-IISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS |
2AF5 Chain:A ((104-146)) | -------------------------------------EDGKTLVSKKVTSKD------KSSTEEKFNEKGELSEKKITRADKSSTE--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3944 for 193 contacts (20.4/contact) +
2D Compatibility (PS) -4475 + (NN) -1418 + (LL) 6212
1D Compatibility (HY) 1200 + (ID) 850
Total energy: 4613.0 ( 23.90 by residue)
QMean score : 0.153
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