Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTV--ANKTELGLIHIYSEFPDYRWV--KDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQ-RADNGYFYNFIYPDHSINKEYKTSV---------AEPNWWTWRALWALTQVYP---TLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
4B46 Chain:A ((1-367)) | MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIP---KDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTEPVYGLGILPGSDEGGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTLAGGGVSTVGYASEGVTAHTTN-RITSLVRKAALGRLTLPC-----EIEGA---------------ERALLVLAG--------------------------------------------------------PPEHLNRKGIERGRKWIEEQT----------GSMEVRGGDYPIPG------------------AEKVAGVILLSGVTNVPRIKELQQVAIEAQD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127105 for 2684 contacts (-47.4/contact) +
2D Compatibility (PS) -32934 + (NN) -1423 + (LL) 7384
1D Compatibility (HY) -5600 + (ID) 3100
Total energy: -162778.0 ( -60.65 by residue)
QMean score : 0.190
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