Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHHHHHHMVAMQSTIPSLTREEIADRMQHNPLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVLQKPSEG-EDLSRQVAENPTSVHKLAGRNLCGLKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA |
2K48 Chain:A ((1-107)) | -MHHHHHHGKPIPNPLLGLDSTENLYFQGIDPFTMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQKL--------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8343 for 539 contacts (15.5/contact) +
2D Compatibility (PS) -11046 + (NN) -1081 + (LL) 3248
1D Compatibility (HY) 3600 + (ID) 850
Total energy: 2214.0 ( 4.11 by residue)
QMean score : 0.170
|
|
|