Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
| 2V8Q Chain:A ((2-157)) | -------------------------------------------------------------------------------SMAWHLGIRS-QSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDEVAPRPGSHTIEFFEMCANLIKILAQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7016 for 634 contacts (-11.1/contact) +
2D Compatibility (PS) -10654 + (NN) -2101 + (LL) 6000
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -17171.0 ( -27.08 by residue)
QMean score : 0.038
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