Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GHMKFTDQQIGVLAGLAISPEWLKQNIAANQLVYGIVKPSDTVPAGVDDYSYLVAADDQDGTIIFFKAEGQTVIIKYTSQRNTKLKAKALTLSQLKKEFYQTRSQKREVDDYVAGLRTE
1X65 Chain:A ((1-89))
GSSGSSGREMGVIAAMRDG--------------FGFIKCVDRDVRMFFHFSEILDGNQLH--------IADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSGPSSG--------
General information:
TITO was launched using:
RESULT:
Template:
1X65.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5940 for 505 contacts (-11.8/contact) +
2D Compatibility (PS) -9380 + (NN) -454 + (LL) 2748
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -17276.0 ( -34.21 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_1X65.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X65-query.scw
PDB file :
Tito_Scwrl_1X65.pdb
: