Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSPTISHKDSSRQRR-------PGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQG----------IPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVG----QTAGY-FLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVY-----SMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN |
| 5C8T Chain:B ((2-526)) | AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKP-------------PPGDQFKHLIPLMYK-GLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGF-TGNLQSNHDQHCQVHGNAHV---ASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQ------------AEVEWKFYDAQPCSDKAYKIEELFYSYATHHDKFTDG----VCLFWNCNVDR---YPANAIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFD-------KSAFTNLKQLPFFYYSDSPCEYV-PLKSATCIT------RCNLGGAVCRHHANEYRQYLDAYNMMISA----GFSLWIYKQFDTYNLWNTFTR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272352 for 3587 contacts (-75.9/contact) +
2D Compatibility (PS) -50012 + (NN) -88 + (LL) 4464
1D Compatibility (HY) -10800 + (ID) 3850
Total energy: -332638.0 ( -92.73 by residue)
QMean score : 0.203
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