Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDTEKPADTPSEEEDFGDPRTYDPDFKGPVANRSCTDVLCCMIFLLCIIGYIVLGLVAWVHGDPRRAAYPTDSQGHFCGQKGTPNENKTILFYFNLLRCTSPSVLLNLQCPTTQICVSKCPEKFLTYVEMQ------LLYTKDKSYWEDYRQFCKTTAKPVKSLTQLLLDDDCPTAIFPSKPFLQRCFPDFSTKNGTLTIGSKMMFQDGNGGTRSVVELGIAANGINKLLDAKSLGLKVFEDYARTWYWILIGLTIAMVLSWIFLILLRFIAGCLFWVFMIGVIGIIGYGIWHCYQQYTNLQERPSSVLTIYDIGIQTNISMYFELQQTWFTFMIILCIIEVIVILMLIFLRNRIRVAIILLKEGSKAIGYVPSTLVYPALTFILL---SICICYWVVTAVFLATSGVPVYKVIAPGGHCIHENQTCDPEIFNTTE-----IAKACPGALCNFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMKKPDDIPRYPLFTAFGRAIRYHTGSLAFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSKFLQCCLRCCFWCLENAIKFLNRNAYIMIAIY----GRNFCRSAKDAFNLLMRNVLKVAVTD---EVTYFVLF-LGKLLVAGSIGVLAFLFFTQRLPVIAQGPASLNYYWVPLLTVIFGSYLIAHGFFSVYAMCVETIFICFLEDLERNDGSTARPYFVTPNLHGILIKKQLVPQKQKE |
| 4UIR Chain:A ((2-646)) | NPITSKFDKVLNASSEYGHV-NHEPDSSKEQQRNT-----------------------------PQKSMPFSDQIGNYQRNKGIPVQS-----YDNSKIYIIGSGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGGSLDGAGNPTDGYIIRG-GREMDMTYENLWDMF--QDIPALEMPAPY---SVLDEYRLINDNDSNYSKARLINNKGEIKDFSKFGLNKMDQLAIIRLLLKNKEELDDLTIEDYF-----SESFLKS-NFWTFWRTMFAFENWHSLLELKLYMHR-FLHAIDGLNDLSSLVFPKYNQYDT-FVTPLRKFLQEKGVNIHLNTLVKDLDIHINT-----EGKVVEGIITEQDGKEVKIPVGKN------DYVIVTTGSMTEDTFYGNNKTAPIIGIDNSTSGQSAGWKLWKNLAAKSEIFGKPEKFCSNIEKS---AWESATLTCKPSALIDKLKEYSVNDPYSGKTVTGGIITITDSNWLMSFTC-----------NRQPHFPEQPDDV-----------LVLWVYALF---MDKEGNYIKKTMLECTGDEILAELCYHLGIEDQLENVQKNTIVRTAFMPYITSMFMPRAKGDRPRVVPEGCKNLGLVGQFVETNNDVVFTMESSVRTARIAVYKLLNLNKQVPDINPLQYDIRHLLKAAKTLNDDKPFVGEGLLRKVLK--GTYFEHVLPAGEEHE----------SFIAEHVNKFREWVKGIRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -524565 for 5130 contacts (-102.3/contact) +
2D Compatibility (PS) -62874 + (NN) 3965 + (LL) 8120
1D Compatibility (HY) -8400 + (ID) 4400
Total energy: -588154.0 ( -114.65 by residue)
QMean score : 0.144
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