Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARLPAGIRFIISFSRDQWYRAFIFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLGYFYNIHSFGFYVVTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSP-SGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ
3WDO Chain:A ((11-176))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAAL-S-D-SIWGIILGRALQGSGAI--AAAVMALL-SDLT-REQNRTKAMAFIG------VSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFS


General information:
TITO was launched using:
RESULT:

Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137619 for 1322 contacts (-104.1/contact) +
2D Compatibility (PS) -16839 + (NN) -1536 + (LL) 20196
1D Compatibility (HY) -8400 + (ID) 1250
Total energy: -145448.0 ( -110.02 by residue)
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_3WDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WDO-query.scw
PDB file : Tito_Scwrl_3WDO.pdb: