Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTAYLAFVGLLASCLG--LELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFW---NHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLALAGALALRNWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAPLGIIFSSFMAASLLGSSLYRIATSKRYHLQ--PMHLLSLAVLIVVFSLFMLTFSTSPGQESPVE---SFIAFLLIELAC---GLYFPSMSFLRRKVI---PETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 4PEI Chain:A ((7-355)) | --QIQHIAIVG---SVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYL----TLFIGGNHESSNVLLHLYNGGFVCFNMYY-------LGVCSCININGLRIVGVSG--IYKSFD----------EKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQID-ISLSHDWP----------QGIVMKGNYKQLYRFQPGFKKDGAS----LGSPINKVILNTLKP------------------------KYWISGHMHC--------------EYHAEEGPTHFIALGK--IGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYI------GLKIIYDSDT----------------FDIQFTSRRFYIEKIYNELNI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312223 for 2770 contacts (-112.7/contact) +
2D Compatibility (PS) -33689 + (NN) 4452 + (LL) 10156
1D Compatibility (HY) -15600 + (ID) 3250
Total energy: -350154.0 ( -126.41 by residue)
QMean score : 0.273
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