Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPWPELGDAQPNPDKYLEGAAGQQPTAPDKSKETNKTDNTEAPVTKIELLPSYSTATLIDEPTEVDDPWNLPTLQDSGIKWSERDTKGKILCFFQGIGRLILLLGFLYFFVCSLDILSSAFQLVGGKMAGQFFSNSSIMSNPLLGLVIGVLVTVLVQSSSTSTSIVVSMVSSSLLTVRAAIPIIMGANIGTSITNTIVALMQVGDRSEFRRAFAGATVHDFFNWLSVLVLLPVEVATHYLEIITQLIVESFHFKNGEDAPDLLKVITKPFTKLIVQLDKKVISQIAMNDEKAKNKSLVKIWCKTFTNKTQINVTVPSTANCTSPSLCWTDGIQNWTMKNVTYKENIAKCQHIFVNFHLPDLAVGTILLILSLLVLCGCLIMIVKILGSVLKGQVATVIKKTINTDFPFPFAWLTGYLAILVGAGMT---FIVQSSSVFTSALTPLIGIGVITIERAYPLTLGSNIGTTTTAILAALASPGNALRSSLQIALCHFFFNISGILLWYPIPFTRLPIRMAKGLGNISAKYRWFAVFYLIIFFFLIPLTVFGLSLAGWRVLVGVGVPVVFIIILVLCLRLLQS---RCPRVLPKKLQNWNFLPLWMRSLKPWDAVVSK--FTGCFQMRCCCCCRVCCRACCLLCDCPKCCRCSKCCEDLEEAQEGQDVPVKAPETFDNITISREAQGEVPASDSKTECTAL |
| 4U1C Chain:C ((6-549)) | ------------QEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASANLS-----------YQPIDQWKSSFNDISKLLSILDQT----------------IDTYQVNEFADPIDFIEDEPKEDSDGV----------------------------------------KRILGSIFSFVERLDD-EFMKSLLNIDPHS----SDYLIRLRDEQSIYNLILRTQLYFEATL----KDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNI-IPAQFKSKFTSKDQLD-------------------------SADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTS---QVQTNINQ-----FDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNS----SNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYS-----GIKVKRIPYS--------------PKS-IRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLP----ENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGD----EITKLEEAMVKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292054 for 3933 contacts (-74.3/contact) +
2D Compatibility (PS) -54674 + (NN) -5219 + (LL) 11296
1D Compatibility (HY) -12800 + (ID) 4700
Total energy: -358151.0 ( -91.06 by residue)
QMean score : 0.189
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