Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MPSSLPGSQVPHPTLDAVDLVEKTLRNEGTSS------SAP----------------VLEEGDTDPWTLPQLKDTSQPWKELRVAGRLRRVAGSVLKACGLLG---------SLYFFICSLDVLSSAFQLLGSKVAGD-----IFKDNVVLSNPVAGLVIGVLVTALVQSSSTSSS--------IVVSM--------VAAKLLTVRVS------VPIIMGVNVGTSITSTLVSMAQ--------SGDRDEFQRAFSGSAVHGIFNWLTVLVLLP-----LESATALLERLSELALGAASLTPRAQAPDILKVLTKPLTHLIVQLDSDMIMSSATG-----------------NATNSSLIKHWCGTTGQPTQENSSCGAFGPCTEKNSTAPADRLPCRHLF--AGTELTDLAVGCILLAGSLLVLCGCLVLIVKL--LNSVLRGRVAQVVRTVINADFPFPLGWLGG-YLAVLAGAGLTFALQSSSVFTAAVVPLMGVGVISLDRAYPLLLGSNIGTTTTAL---LAALASPADRMLSALQVALIHFFFNLAGILL----------WYLVPALR--LPIPLARHFGVVTARYRWVAGV--------------------YLLLGFLLLPL--------------------AAFGLSLAGGMELAAVGGPLVGLVLLVILVTVLQRRRPAWLPVRL------------RSWAWLPVWLHSLEPWDRLVTRCCPCNVCSPPKA-------------------------TTKEA--YCYENPEILASQQL |
| 5AGA Chain:A ((3-827)) | DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKE--KKYYLQSLFQEVG---IKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDN----HSVLLFCPSKKWCEKLADIIAREFYNLHHQASECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQ-RGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMGAIEACVMWLLENEFIQSTEEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSARKEAVEERRNMRTIWVTGRKGLTEREAAALIVEEARMILQQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -378989 for 4310 contacts (-87.9/contact) +
2D Compatibility (PS) -60253 + (NN) -11460 + (LL) 248
1D Compatibility (HY) -30000 + (ID) 5900
Total energy: -486354.0 ( -112.84 by residue)
QMean score : 0.154
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