Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLGASLVGVLLFSKLVLKLPWTQVGFSLLFLYLGSGGWRFIRVFIKTIRRDIFGGLVLLKVKAKVRQCLQERRTVPILFASTVRRH----PDKTALIFEGTDT----HWTFRQLDEYSSSVANFLQARGLASGDVAAIFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALLHCLTTSRARALVFGSEMASAICEVH--------------ASLDPSLSLFCSGS---WEPGAVPPSTEHLDPLLKDAPKHLPSCPDKGFTDKLFYIYTSGTTGLPKAAIVVHSRYYRMAALVY-YGFRMRPNDIVYDCLPLYHSAGNIVGIGQCLLHGMTVVIRKKF----SASRFWDDCIKYNCTIVQYIGELCRYLLNQPPR--EAENQHQVRM--ALGNGLRQSIWTNFSSRFHIPQ--VAEFYGATECNCSL-----GNFDSQVGACGFNSRILSFVYPIRLVRVNEDTMELIRGPDGVCIPCQPGEPGQLVGRIIQKDPLRRFDGYLNQGANNKKIAKDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMADVAVYGVEVPGTEGRAGMAAVASPTG-NCDLERFAQV---LEKELPLYARPIFLRLLPELHKTGTYKFQKTELRKEGFDPAIVKDPLFYLDAQKGRYVPLDQEAYSRIQAGEEKL |
| 1PG4 Chain:A ((77-617)) | ------------------------------------------------------------------------------LAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGR---DLWWRDLIEKASPEHQPEAMNA--EDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSA---TRPFFGVQPA-LVDNEGHPQEGATEGNLVITDSWPGQARTLFG-------------------DHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIP-HAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDADPGVVEKLLEEKQA-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292056 for 4250 contacts (-68.7/contact) +
2D Compatibility (PS) -52758 + (NN) -16738 + (LL) 9124
1D Compatibility (HY) -18800 + (ID) 6700
Total energy: -377928.0 ( -88.92 by residue)
QMean score : 0.365
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