Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MRPALAVGLVFAGCCSNVIFLE---LLARKHPGCGN------IVTFAQFLFIAVE-------------------GFLFEA-DLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIA-------NMILGIIILKKRYSIFKYT--SIALVSVGI----------FICTFMSAKQVTSQSSLSE-NDGFQ----------AFVWWLLG----------------------IGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYEIPVIGVTLP-----IMWFYLLMNIITQYV--------CIRGVFILTTE--CASLTVTLVVTLRKFVSLIFSILYFQN---------------------------PFTLWHWLGTLFVFIGT-----------LMYTEVWNNLG--------TTKSEPQKDSKKN----------- |
| 4PE2 Chain:A ((3-498)) | IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEAL--SLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPL-GAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNAAASNINKAKVASVESDYSSVKSAALSYYSDKNTMPPSGELDALETYMDTLPDKADIGGGYKLLLVNNKLALKIGDGTAADSVTLTKAQIEKLLSDIGPKKIYTENTLKTELQKNSTLKDGTLYIVLIDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298507 for 2209 contacts (-135.1/contact) +
2D Compatibility (PS) -33819 + (NN) -6784 + (LL) 260
1D Compatibility (HY) -2400 + (ID) 3000
Total energy: -344250.0 ( -155.84 by residue)
QMean score : 0.131
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