Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSSLAPGVWFFRAFSRDSWFRGLILLLTFLIYACYHMSRKPISIVKSRLHQNCSEQIKPINDTHSLNDTMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAG---MLLSGLFTSLFGLGYFWNIHE-LWYFVVIQVCNGLVQTT----GWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIAGIWVNGQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVA---HFSAKEAGDLSTLFDVGGIIGGIVAGLVSDYTNGRATTCCVMLILAAPMMFLYNYIGQDGIASSIVMLIICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTVTAIIDGTGSIGAALGPLLAGLISP-TGWNNVFYMLISADVLACLLLCRLVYKEILAWKVSLSRGSGYKEI |
| 2CFQ Chain:A ((38-396)) | ---------------------------------------------------------------------------NHISK----SDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIF-----GPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS--RRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVL-LFFAKTDAPSSATV-A--N--A----VGA-N----------HS---------AF----SLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRII-GSSFA-T-SALEVVILKTLHMFEVPFLLVGCFKYI-TSQF-EVRFSATIYLVCF-----CFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227721 for 2660 contacts (-85.6/contact) +
2D Compatibility (PS) -33951 + (NN) 7379 + (LL) 7900
1D Compatibility (HY) -16400 + (ID) 2350
Total energy: -265143.0 ( -99.68 by residue)
QMean score : 0.179
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