Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MEAKEKQHLLDA-----RPAIRSYTGSLWQEGAGWIPLPRPGLDLQAIELAAQSNHHCHAQKGPDSHCDPKKGKAQRQLYVASAICLLFMIGEVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTLHQSGHGHSHGTTNQQEENPSVRAAFIHVIGDFMQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGVDFTAVRDLLLSVEGVEALHSLHIWALTVAQPVLSVHIAIAQN---TDAQAVLKTASSRLQGKFHFHTVTIQIEDYSEDMKDCQACQGPSD |
| 2QFI Chain:A ((5-290)) | YGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRY--SLQPADDNHSFGHGKA--------------------ESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILV---------SFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLA--LGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSG-PTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVV------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85209 for 2001 contacts (-42.6/contact) +
2D Compatibility (PS) -27401 + (NN) 2636 + (LL) 3576
1D Compatibility (HY) -12400 + (ID) 2450
Total energy: -121248.0 ( -60.59 by residue)
QMean score : 0.058
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