Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MVLGPEQKM--SDDSVSGDHGESASLGNINPAYSNPSLSQSPGDSEE--YFATYFNEKISIPEEEYSCFSFRKLWAFTG-PGFLMSIAYLDPGNIESDLQSGAVAG---FKLLWILLLATLVGLL-----LQRLAARL-------GVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLS---VGRIPLWGGVLITIADTFVFLFLDK--YGLRKLE------AFFGFLITIMALTFGYEYVTVKPSQSQVLKGMFVPSCSGCRT-PQIEQAVGIVGAVIMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCTNTSSP--------------------HAGLFPKDNSTLAV-----------DIYKGGVVLGCYFGPAALYIWAVGI-LAAGQSSTMTGTYSG------QFVMEG----FLNLKWSRFARVVLTRSIAIIPTLLVAVFQDVEHLTG--MNDFLNVLQSL---QLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSINMYFVVVYVRDLGHVALYVVAAVVSVAYLGFVFYLGWQCLIALGMSFLDCGHTCHLGLTAQPELYLLNTMDADSLVSR--------------------- |
| 4R3Z Chain:B ((17-675)) | DVLVSECSARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNILRKSLQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFP-DYLTVSPPIGD-LQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRM-NDIVKEFEDRGFVQVDDGRKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY-DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSI-ARLAN-----IDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTL-CDYIYELATAFTEFYDSCYCVEKDRQTGKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338747 for 3628 contacts (-93.4/contact) +
2D Compatibility (PS) -56565 + (NN) 286 + (LL) 744
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -417032.0 ( -114.95 by residue)
QMean score : 0.135
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