Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDRNILMLILPLI-LLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQI---VAL---PE----AQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKAKKRCIFFLQDKRKRNFLI |
| 1ZCD Chain:A ((258-349)) | ---------------------------------------------------------------------------------------------------------------------------------------------WVAYLILPLFAFAN---AGVSLQGVTLDGL--TSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVG-ILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40005 for 387 contacts (-103.4/contact) +
2D Compatibility (PS) -7578 + (NN) 2207 + (LL) 28676
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -22750.0 ( -58.79 by residue)
QMean score : -0.224
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