Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLVDRVRGHWRIAAGLLFNLLVSICIVFLNKWIYVYHGFPNMSLTLVHFVVTWLGLYICQKLDIFAPKSLPPSRLLLLALSFCGF---VVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFGEGGI-FGPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYN-----MFGHFKFCITLFGGYVLF---KDPLSINQALGILCTLFGILAYTHFKLSEQEGSRSKLAQRP |
| 1MRO Chain:B ((188-442)) | --GYALRNIMVNHVVAATLKNTLQAAALSTILEQTAMFEMGDAVG---------------------------AFERMHLLGLAYQGMNADNLVFDLVKANGKEGT-------VGSVIADLVERALEDG----------VIKVEKELTDYKVYGTDDLAMWNAYAAAGLMAATMVNQGAAR-------------AAQGVSSTLLYYNDLIEFETGLPSVDFGKVEGTAVGFSFFS-----------HSIYGGGGPGIFNGNHIVTRHSKGFAIPCVAAAMALDAGTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261614 for 2126 contacts (-123.1/contact) +
2D Compatibility (PS) -24834 + (NN) -5020 + (LL) 7784
1D Compatibility (HY) -400 + (ID) 2250
Total energy: -286334.0 ( -134.68 by residue)
QMean score : 0.241
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