Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MANMNSDSRHLG---TSEVDHERDPGPMN-----------------------------IQF---EPSDLRSKRPFCIEPTNIVNVN-----HVIQRVSDHASAMNKRIHYYSRLTTPADKALIAPDHVVPAPEE------CYVYS-PLGSAYKLQSYTE------GYGKNTSLVTI---------------FMIWNTMMGT-------SILSIPWGIKQ-AGFTTGMCVIILMGLLTLYCCYRVVKSRT-MMFSLDTTS-WEYPDVCRHYFGSFGQWSSLLFSLVSLIGAMIVYWVLMSNFLFNTGKFIFNFIHHINDTDTILSTNNSNPVICPSAGSGGHP--DNSSMIFYANDTGAQQFEKWWDKSRTVPFYLVGLLLPLLNFKS------------PSFFSKFNILGTVSVLYLIFLVTFKAVRLGFHLEFHWFIPTEFFVPEIRFQF--PQLTGVLTLAFFIHNC-------IITLLKNNKKQENNVRDLCIAYMLVTLTYLYIGVLVFASFPSPPLSKDCIEQNFLDNFPSSD------TLSFIARIFLLFQM----------MTVYPLLGYLAR----------VQLLGHIFGDIYPSI-------FHVLILNLIIVGAGVIMACFYPNIGGI--IRYSGAACGLAFVFIY-PSLIYIISLHQEERLTWPKLIFHVFIIILGVANLIVQFFM |
3WOL Chain:A ((1-696)) | GEGMWVPQQLPEIAGPLKKAGLKLSPQQISDLTGDPMGAVVALGGCTASFVSPNGLVVTNHHCAYGAIQLNSTAENNLIKNGFNAPTTADEVSAGPNARVFVLDEITDVTKDAKAAIAAAGDDALARTKALEAFEKKLIADCEAEAGFRCRLYSFSGGNTYRLFKNLEIKDVRLAYAPPGSVGKFGGDIDNWMWPRHTGDFAFYRAYVGKDGKPAAFSKDNVPYQPKHWLKFADQP---LGAGDFVMVAGYPGSTNRYALAAEFDNTAQWTYPTIARHYKNQIAMVEAAGKQNADIQVKYAATMAGWNNTSKNY-DGQLEGFKRIDAAGQKLREEAAVLGWLKGQGAKGQPALDAHAKLLDLLEQSKATRDRDLTLALFNNTAMLGSATQLYRLSIEREKPNAERESGYQERDLPAIEGGLKQLERRYVAAMDRQLQEYWLNEYIKLPADQRVAAVDAWLGGNDAAAVKRALDRLAGTKLGSTEERLKWFAADRKAFEASNDPAIQYAVAVMPTLLKLEQERKTRAGENLAARPVYLQALADYKKSQGEFVYPDANLSLRITFGNVMGYAPKDGMEYTPFTTLEGVVAKETGQDPFDSPKALLDAVAAKRYGGLEDKRIGSVPVNYLSDLDITGGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPKMTRMIAVD-------GRYLRWIMQEVYPAPQLLKEMNV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -412981 for 4093 contacts (-100.9/contact) +
2D Compatibility (PS) -56021 + (NN) 3529 + (LL) 1092
1D Compatibility (HY) -400 + (ID) 4200
Total energy: -468981.0 ( -114.58 by residue)
QMean score : 0.136
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