Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAW-----GGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
| 1D2P Chain:A ((636-737)) | --------------------------DDNNNQDGKRPTEIKVELYQDGKA------TGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTK-VKGYTTHVDNNDMGNLITTNKYTPETTSSIGEKVWDDKDN---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16546 for 485 contacts (34.1/contact) +
2D Compatibility (PS) -10310 + (NN) -1543 + (LL) 10128
1D Compatibility (HY) -400 + (ID) 1400
Total energy: 13021.0 ( 26.85 by residue)
QMean score : 0.154
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