Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | CSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSTYTEHSNAALHFLGAGDTSATNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGAMHSDLGLVRSIETLNAAVPRFNAPSIQDGRGLKIVAPQAPEIDLIAPRGSGASAPAIRAMWCDGSLADTTRYIGATQPGSTFYIGASGHDGEKFDSMRGSVAIKSAGGWGPTSTPTQVVLETCESGSISRLPRWGVDHNGTLMPMADNRYNLGWGSGRVKQVYAVNGTINTSDARLKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMNDIREHCGLTVQRAIEIMESFGLDP---FKYGFICYDKWDEHTVVSEYG---PANEDGTENPI---------YKTIPAGDHYSFRLEELNLFIAKGFEARLSAIEDKLGM |
| 3GW6 Chain:A ((85-270)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLFQSADVKPYNDNVTALGGPSNRFTTAYLGSNPIVTANGERKTEPVVFDDAFLDAWGDVHYIMYQWLDAVQLKGNDARIHFGVIAQQIRDVFIAHGLMDENSCRYAVLCYDKYPRMTDTVFSHNEIVEHTDEEGNVTTTEEPVYTEVVIHEEGEEWGVRPDGIFFAEAAYQRRKLERIEARLS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28669 for 826 contacts (-34.7/contact) +
2D Compatibility (PS) -18029 + (NN) -3057 + (LL) 9316
1D Compatibility (HY) -3200 + (ID) 1900
Total energy: -45539.0 ( -55.13 by residue)
QMean score : 0.096
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