Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNINKAKVASVESDYSSIKSAALSYYSDTNK-IPVTPDG-QTGLNVLETYMESLPDKADIGGEYKLIKVGNKLVLQ---IGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTVMDSTK |
| 3PYV Chain:C ((77-171)) | -----AKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQV-------------VAGPDAPIQVGNALPLRFIPVGTVVHAVELEPKKGAKLARAAGTSAQIQGREGD------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13587 for 499 contacts (27.2/contact) +
2D Compatibility (PS) -8967 + (NN) 2746 + (LL) 2924
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: 6190.0 ( 12.40 by residue)
QMean score : 0.060
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