Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSETTIILTDDGVTDIGMARNTIHQMVGLVD--DLVASEATASQLREALYAALARGLGFQASVGQSSPLLLRRSVLLSLRGLARRLARIEADALTDDIQPRDIVLSAKELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG
1UG7 Chain:A ((1-128))
GSSGSSGMSEVTRSLLQRWGASLRRGADFDSWGQLVEAIDEYQILARHLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQSTQSQEEFKLEDLKKLEPILKNILT---YNKEFPFDVQPISGP-----------SSG
General information:
TITO was launched using:
RESULT:
Template:
1UG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25576 for 925 contacts (-27.6/contact) +
2D Compatibility (PS) -13344 + (NN) -5109 + (LL) 920
1D Compatibility (HY) 2000 + (ID) 850
Total energy: -41959.0 ( -45.36 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1UG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UG7-query.scw
PDB file :
Tito_Scwrl_1UG7.pdb
: