Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------------MQRQPVSSS--RILSIGYDPDNRMLEIQFR-EQGTYQYLGVPERAHQNFMSAVSKGRFFDGVIKGKFLCRKIG
1IM3 Chain:D ((1-95))
PWFQIEDNRCYIDNGKLFARGSIVGNMSRFVFDPKADYGGVGENLYVHADDVEFVPGESLKWNVRNLDVMPIFETLALRLVLQGDVIWLRCVPEL-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IM3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2866 for 135 contacts (-21.2/contact) +
2D Compatibility (PS) -4324 + (NN) -2203 + (LL) 1768
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -10375.0 ( -76.85 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_1IM3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IM3-query.scw
PDB file :
Tito_Scwrl_1IM3.pdb
: