Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFSKDEKNP-IKRALQGELLQNEPFIQLCT-KI-----ENYLMDTEAVNEQLIELNEQLTMRLKE-KG-------LKPGEKG--ATKQLRTLIQ----------------EILTEAGFREGMLQTIGNKPLKK-EDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILK-----QKKDSSFLEN---IP---TSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSR------SPEWLSD-HIQNDEDQIF-PVLREVIKNRTEK---GKTEENKGKLQKKLENPPEHYEKHEEIENILMPKPK |
| 3GN6 Chain:A ((22-321)) | -------FNPWTDAALD--TIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRFADGRAARAAGFEALFETHI-HPLLHAMADGPELLAYRAVLQ--SVVAGDRHAIYRGAEEIRSFLRRPVELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEP---SGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAVVGPV--EPFYLTRRLVVAD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33135 for 1578 contacts (21.0/contact) +
2D Compatibility (PS) -25140 + (NN) -7116 + (LL) 388
1D Compatibility (HY) -5200 + (ID) 2200
Total energy: -6133.0 ( -3.89 by residue)
QMean score : 0.170
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