Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHFISPQKIVPLSYNEFIRKVVSDHSIQEQEKEIRRLSQIVFGNQNQLANQLSQIH-ENPSFTKIISNTLTNSPESFAKLAGSKTFGIKNSKRKQAEKNISKLVEAIHKYADAVENSMGNIIKNHNAEQKRLAQSVELPSD
2F4M Chain:B ((13-56))
---------------------------------------FQQMRQIIQQNPSLLPALLQQIGRENPQ----LLQQISQHQEHFIQML------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2F4M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9806 for 221 contacts (-44.4/contact) +
2D Compatibility (PS) -4355 + (NN) 413 + (LL) 7316
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -11032.0 ( -49.92 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_2F4M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F4M-query.scw
PDB file :
Tito_Scwrl_2F4M.pdb
: