Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKN--EIVNDF---NESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSIS-KDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE |
| 4F2U Chain:A ((93-218)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMG-GTYIKSGYGADTSGIQWADNATFETKI---NNGSLNLKVQDEYKDYYDKKVEA------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21969 for 706 contacts (31.1/contact) +
2D Compatibility (PS) -12652 + (NN) -775 + (LL) 14840
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: 15382.0 ( 21.79 by residue)
QMean score : 0.089
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