Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPLEQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPEAGWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
1EOG Chain:A ((2-197))
---PYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETW-QEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLY-GKDQQEAALVD-MVNDGVEDLRCKYISLIYTNYEAGKDDYVKALP---GQLKPFETLLSQNQGGKTFIVGDQIAFADYNLLDLL-LIHEVLAPGCLDA----FPLLSAYVGRLSARPKL-KAFLASPE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EOG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103410 for 1454 contacts (-71.1/contact) +
2D Compatibility (PS) -22317 + (NN) -19914 + (LL) 4176
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -156265.0 ( -107.47 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1EOG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EOG-query.scw
PDB file :
Tito_Scwrl_1EOG.pdb
: