Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTAYLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQ-HYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCC-LTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPLLA--L-AGALALRNWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVL-DPHGAP---L---GIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLIELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMALLAVVGLFTVVRHDAELRVPSPTEEPYAPEL |
| 3WDO Chain:A ((16-383)) | ---------------------------------------------GTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGA--IAAAVMALLSDL------TREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHA--LFWMIAILATTGIALTIWVVPNSSTHVLNR--ESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLM-STFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVK-RKM--KQ--VFVFCVGLIVVAEIVLWNAQ----TQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -379643 for 3072 contacts (-123.6/contact) +
2D Compatibility (PS) -36670 + (NN) -17914 + (LL) 4956
1D Compatibility (HY) -12400 + (ID) 2800
Total energy: -444471.0 ( -144.68 by residue)
QMean score : 0.309
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