Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATKTELSPTARESKNAQDMQVDETLIPRKVPSLCSARYGIALVLHFCNFTTIAQNVIMNITMVAMVNSTSPQSQLNDSSEVLPVDSFGGLSKAPKSLPAKSSILGGQFAIWEKWGPPQERSRLCSIALSGMLLGCFTAILIGGFISETLGWPFVFYIFGGVGCVCCLLWFVVIYDDPVSYPWISTSEKEYIISSLKQQVGSSKQPLPIKAMLRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPFIVAWVIGMVGGYLADFLLTKKFRLITVRKIATILGSLPSSALIVSLPYLN----SGYIT--ATALLTLSCGLSTLCQSGIYINVLDIA-PRYSSFLMGASRGFSSIAPVIVPTVSGFLLSQDPEFGWRNVFFLLFAVNLLGLLFYLIFGEADVQEWAKERKLTRL |
| 1PW4 Chain:A ((54-201)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPA---------GLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMG---WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW--FNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91228 for 937 contacts (-97.4/contact) +
2D Compatibility (PS) -13715 + (NN) 1908 + (LL) 17928
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -90307.0 ( -96.38 by residue)
QMean score : -0.024
|
|
|