Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQTTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQ-----NPSSATVLVAGGFAGIASWVAATPLDMIKSRMQMDGLR---RRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG
1OKC Chain:A ((4-201))-----------------------------------------------------------------------------------------------ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI--SAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLP


General information:
TITO was launched using:
RESULT:

Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63081 for 1247 contacts (-50.6/contact) +
2D Compatibility (PS) -19028 + (NN) -1041 + (LL) 7320
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -84130.0 ( -67.47 by residue)
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_1OKC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OKC-query.scw
PDB file : Tito_Scwrl_1OKC.pdb: