Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEV-----HRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFL----IVVVNKSVLTNYRFPSSLCV---------GLGQMVATVAVLWVGKALRVVKFPD--------LDRNVPRKTFPLPLL-------YFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAE--------GVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDL------EGYAFILIND----VLTAANGAYV----------KQKLDSKEL-GKYG--------------LLYYNALFM----ILP------------TLAIAYFTGDAQKAVEFEGWADTLF---LLQFTLSCVMG---------------FILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDYI--------FTWTN--------FIGLNISIAGSLVYSYI-TFTEEQLSKQSEANNKLDIKGKGAV-------------- |
4IWS Chain:A ((23-515)) | MNRSALDFRHFVDHLRRQGDLVDVHTEVDANLEIGAITRRVYER--RAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRAAMRAEPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFGTYGFHVVQTPDGSWDSWSVGRLMLVDRNTLAGPTIPTQHIGIIREQWRRLG-KPTPWAMALGAPPAALAAAGMPLPEGVSEAGYVGALVGEPVEVVRTQTNGLWVPANTEIVLEGEISLDETALEGPMGEYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAGLPVDMVWCSYEAATCWAVLSIDVQRLAALGTDAAAFAARVAETVFGSHAGHLVPKLILVGNDIDVTEIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205733 for 2521 contacts (-81.6/contact) +
2D Compatibility (PS) -36883 + (NN) -663 + (LL) 512
1D Compatibility (HY) -8400 + (ID) 3850
Total energy: -255017.0 ( -101.16 by residue)
QMean score : 0.187
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