Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MSSSVKTPALEELVPGSEEK-----PKGRSPLS----WGSLFGHRSEKIVFAKSDGGTDENVLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFC----TLFLNKYILSLLGG--------EPSMLGAVQML-------------------------------STTVIGCVKTLVPCCLYQHKARLSYP-----PNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP--IFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPVPPSER--------HGVRPHGENLPGDFQVPQALHRVALSMALPCPMLPAS--------------------------------------- |
| 2WZP Chain:R ((1-375)) | MLEANVYDNFNPNYYNISDFSMPNGKKEKRGLPIPKARCQVINYELWETGYLYTSSATLTVSVEVG---DIVQILFPEVVPIEEALG---KKKKLNLDMVYLVTDVDESNKATLKNYFWAMIESLDVPNAITKTTNFAIIDYLIDPNKNNLMSYGYFFNSSIFAGKATINRKAETSSAHDVAKRIFSKVQFQPTTTIQHAPSETDPRNLLFINFASRNWNRKRITTRVDIKQSVTMDTETIVERSAYNFAVVFVKNKATDDYTDPPKMYIAKNNGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISPSTIVTRLIFNQNELLPLYVNDLVDIWYEGKLYSGYIADRVKTEFNDRLIFVESGDKPNVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64244 for 1570 contacts (-40.9/contact) +
2D Compatibility (PS) -27141 + (NN) 2082 + (LL) 400
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: -98403.0 ( -62.68 by residue)
QMean score : 0.127
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