Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPPRRHRGAGRPGVLSSSPPFRLRSA--KFSGIALEDLRRALKTRLQMVCVFVMNRMNSQNSGFTQRRRMALGIVILLLVDVIWVASSELTSY--VFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGLRGKHAAF-FADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPVKEQE----------SILKTVGKLTATQVAKISFFFCFVW----FLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVF---PSNSGDRFTLSKLLAVILSIG------GVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRKHRIQRVPEDSEQCESLISMHSVSQEDGAS |
| 1IU4 Chain:A ((1-331)) | --------DSDDRVTPPAEPLDRMPDPYRPSYGRAETVVNNYIRKWQQV---YSHRDGRKQQMTEEQREWLSYGCV-----GVTWVNSGQYPTNRLAFASFDEDRFKNELKNG------------RPRSGETRAEFEGRVAKESFDEEKGFQRAREVASVMNRAL-ENAHDESAYLDNLKKELANGNDALRNEDARSPF-YSALRNTPSFKERNGGNHDPSRMKAVIYSKHFWSGQDRSSSADKRKYGDPDAFRPAPGTGLVDMSRDRNIPRSPTSPGEGFVNFDYGWFGAQTEADADKTVWTHGNHYHAPNGSLGAMHVYESKFRNWSEGYSDFDRGAYVITFIPKSWNTAPDKVKQGWP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88948 for 2335 contacts (-38.1/contact) +
2D Compatibility (PS) -30864 + (NN) 3811 + (LL) 20008
1D Compatibility (HY) 4800 + (ID) 2400
Total energy: -93593.0 ( -40.08 by residue)
QMean score : 0.201
|
|
|