Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVG---ALATSVWLCLLCYFAFP-FQLLIASTFIGAFCGNYT--TFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTYM-LFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPL---CWNEVFIGYGSALGSASFL-TSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLAR-VPFLFTIVPFSVLRSMLSKVVRSTEQGTLFAC-IAFLETLGGVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR |
| 2CFQ Chain:A ((10-394)) | ---WMFGLFFFFYFFIMGAYFPFFPIWLHDI-----NHIS-----------------------------KSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFG----PLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS---RRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLL-FFAKTDAPSSATVANAVG-AN-HSAFSLKLALELFRQP------KLWFLSLYVIGVSCTYDVFDQQFANFFTSF-FATGEQGTRVFGYVTTMGELLNASIMFFAPLIIN-RIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIG---FQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -386136 for 3090 contacts (-125.0/contact) +
2D Compatibility (PS) -36928 + (NN) 3979 + (LL) 4900
1D Compatibility (HY) -21200 + (ID) 1950
Total energy: -437335.0 ( -141.53 by residue)
QMean score : 0.184
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