Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MAFL----MHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIG------PLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALV-----DCTSS-------------VTFLPFMSR-------LPTYYLTTFFVGEGLSGLLPALVALAQGSG--LTTCVNVTEISDSVPSPVPTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFS--------PLVFFLLLSIMMACCLVAFFVLQRQPRCWEASVEDLLN---------------DQVTLHSIRPREENDLGPAGTV------------------DSSQGQGYLEEKAAPCCPAHLAFIYTL----VAFVNALTNGMLPSVQTYSCL-SYGPVAYHLAATL------SIVANPLASLVSMFLPNRSLLFLGVLSVLGTCFGG----YNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCL-------SYVKVMLGVVLR--DLSRSALLWCGAAVQL---GSLLGALLMFPLVNVLRLFSSADFCNLHCPA------------------- |
| 4Q86 Chain:A ((2-583)) | TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGP-FVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLP----------EIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDS-DLHAFAAHQSLLKAYEKLQRAKAAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -403922 for 3439 contacts (-117.5/contact) +
2D Compatibility (PS) -47482 + (NN) 3978 + (LL) 1012
1D Compatibility (HY) -10000 + (ID) 3900
Total energy: -460314.0 ( -133.85 by residue)
QMean score : 0.114
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