Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQMLRGAVIIFTGLFSVAFLGRRLVLSQWLGILATIAGLVVVGLADLLSKHDSQHKLSEVITGDLLIIMAQIIVAIQMVLEE---------KFVYKHNVHPLRAVGTEG--LFGFVILSLLLVPMYYIPAGSFSGNPRGTLEDALDA----FCQVGQ-QPLIAVALLGNISSIAFFNFAGISVTKELSATTRMVLDSLRTVVIWALSLALGWEAFHALQILGFLILLIGTALYNGLHRPLLGRLSRGRPLAEESEQERLLGGTRTPINDAS |
| 1L9V Chain:A ((1-313)) | MAELAC-------------------------------------FCYPHLENDSYKFIPFNNLAIKAMLT--AKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDNSRGMNFET----IMFTKVAMLICEALN----SLKVTQANVSNVLSRVVS--IRHLENLVIRKENPQ---DILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVFQNAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHGKGHYRIVKYSSVANHADRVYATFKSNVKTGVNNDF--NLLDQRIIW-----QNWYAFTSSMKQGNT--------LDVCKRLLFQKMKPEKNPFKGLSTDRKMDEVS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239498 for 2147 contacts (-111.6/contact) +
2D Compatibility (PS) -29955 + (NN) 2774 + (LL) 5756
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -272473.0 ( -126.91 by residue)
QMean score : 0.185
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