Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHTTESKNEHLEDENFQTSTTPQSLIDPNNTAQEETKTVLSDTEEIKPQTKKETYISCPLRGVLNVIITNGVILFVIWCMTWSILGSEALPGGNLFGLFIIFYSAIIGGKILQLIRIPLVPPLPPLLGMLLAGFTIRNVPFINEHVHVPNTWSSILRSIALTIILIRAGLGLDPQALRHLKVVCFRLAVGPCLMEASAAAVFSHFIMKFPWQWAFLLGFVLGAVSPAVVVPYMMVLQENGYGVEEGIPTLLMAASSMDDILAITGFNTCLSIVFSSGGILNNAIASIRNVCISLLAGIVLGFFVRYFPSEDQKKLTLKRGFLVLTMCVSAVLGSQRIGLHGSGGLCTLVLSFIAGTKWSQ--EKMKVQKIITTVWDIFQPLLFGLVGAEVSVSSLESNIVGISVATLSLALCVRILTTYLLMCFAGFSFKEKIFIALAWMPKATVQAVLGPLALETARVSAPHLEPYAKDVMTVAFLAILITAPNGALLMGILGPKMLTRHYDPSKIKLQLSTLEHH |
4BWZ Chain:A ((3-386)) | ------------------------------------------------------------------------------------------GAEHLLEIFYLLLAAQVCAFIFKRL------NQPVVIGEVLAGVLVG--PALLGLVH-EGEILEFLAELGAVFLLFMVGLETRLKDILAVGKEAFLVAVLGVALPFLGGYLYGLEI-GFETLPALFLGTALVATSVGITA---RVLQELGV-LSRPYSRIILGAAVIDDVLGLIVLA-CVNGVAETGQVEVGAITRLIVLSVVFVGLAVFLSTLI-------ARLPLERLPVGSPLGFALALGVGMAALAASIGLAPIVGAFLGGMLLSEVREKYRLEEPIFAIESFLAPIFFAMVGVRLELSALASPVVLVAGTVVTVIAILGKVLGGFLGALTQ-GVRSALTVGCGMAPRGEVGLIVAALGLKA---GAVNEEEYAIVLFMVVFTTLFAPFALKPLIAWTERERAAKE----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -416477 for 3512 contacts (-118.6/contact) +
2D Compatibility (PS) -39549 + (NN) -11539 + (LL) 9012
1D Compatibility (HY) -30000 + (ID) 3900
Total energy: -492453.0 ( -140.22 by residue)
QMean score : 0.353
|
|
|