Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHHHHHHSHM-VVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVN-------KDMSIQELAV--LVSGQK----------------------------------------------------------------------------------------- |
| 1LM5 Chain:A ((2616-2811)) | -------SSPIAAIFDTENLEKISITEGIERGIVDSITGQRLLEAQ---------ACTGG---IIHPTTGQKLSLQDAVSQGVIDQDMATRLKPAQKAFIGFKMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQDTSSYAKILTCPKTKLKISYKDAINRSMVEDITGLRLLEAASVSSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4373 for 618 contacts (7.1/contact) +
2D Compatibility (PS) -9603 + (NN) -3115 + (LL) 1168
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -10427.0 ( -16.87 by residue)
QMean score : 0.287
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