Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMS-EFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGA--AEWDV-HDGVFTV-NKKK------GDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQGM------------YEVQVLDCYNNPTYVNGQ-----TGSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHT-------TILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL- |
| 4JQT Chain:A ((1-431)) | GQTWEPLFNGKNLKGWKKLNGKAEYKIVDGAIVGISKMGTPNTFLATTKNYGDFILEFDFKIDDGLNSGVQLRSESKKDYQNGRVHGYQFEIDPSKRAWSGGIYDEARRNWLYPLTLNPAAKTAFKNNAWNKARIEAIGNSIRTWINGVPCANIWDDMTPSGFIALQVHAIGNASEEGKTVSWKDIRICTTDVERYQTPETEEAPERNMIANTISPREAKEG-------------WALLWDGKTNNGWRGAKLNAFPEKGWKMEDGILKVMKSGGAESANGGDIVTTRKYKNFILTVDFKITEG--------ANSGVKYFVNPDLNKGEGSAIGCEFQILDDDKHPDAKLGVKGNRKLGSLYDLIPAPEKKPFNKKDFNTATIIVQ------------DNHVEHWLNGVKLIEYTRNTDMWNALVAYSKYKNWPNFGNSAEGNILLQDHGDE---VWFKNVKIKELK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72143 for 1499 contacts (-48.1/contact) +
2D Compatibility (PS) -23805 + (NN) -450 + (LL) 396
1D Compatibility (HY) -4400 + (ID) 2700
Total energy: -103102.0 ( -68.78 by residue)
QMean score : 0.292
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