Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKMEKKWPFVFNGIVIFC-LILLILGMRWQAKKEESEVLNVTESLQKESEITSFSEEEEAVLY---------MLSALKKNDLDMALR-----------GCAIDETALQINFVKTAEELPGMQLIDLPAPTSDYSYYFPLTSAEMTK--------AYIEQFEELSTEIPEIETLEVLEIAEKKEKEREEQLAECL--AAQEVSELEIYVKCGEQSYRLGFTAVQYEKNWKIHSLKEGLLYETDIPACVQMEEMREAKKTYVLPNQLTGANYFQAMPISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTMLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYMVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVMRLSKEESRKTSEQSVLKAEKNER |
| 1KOR Chain:A ((1-395)) | -----------MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQG--EEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSF----QGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWA-EPPKGMFRMTQDP--EEAPDAPEYVEVEFFEGDPVAVNGERL-SPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYET-PGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFW--YAPEREALQAYFDH-VARSVTGVARLKLYKG-NVYVVGRKAPKSLYR--------------GYDQKDAEGFIKIQALRLRVRALVER-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8074 for 2652 contacts (-3.0/contact) +
2D Compatibility (PS) -36217 + (NN) -460 + (LL) 5304
1D Compatibility (HY) -800 + (ID) 2450
Total energy: -42697.0 ( -16.10 by residue)
QMean score : 0.069
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