Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
4DZU Chain:A ((82-155))
----------------------------------SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILS--------------GGSG--------------------------GWMEWDREINNYTSLIHSLIEESQNQQEKNEQE-----
General information:
TITO was launched using:
RESULT:
Template:
4DZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4858 for 362 contacts (13.4/contact) +
2D Compatibility (PS) -8114 + (NN) -2514 + (LL) 5952
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -10668.0 ( -29.47 by residue)
QMean score : 0.131
(partial model without unconserved sides chains):
PDB file :
Tito_4DZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DZU-query.scw
PDB file :
Tito_Scwrl_4DZU.pdb
: