Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKLFSI-FTLVILVFAT------ACT-N-KSEKATVSDTNEKPKEEI-KIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMK-GKFIYSENEWKPEI-KYE-VKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGMGVGKVDLDISGNYKNNVKVNIEGGVGEATVYL-PKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNI-EAGVGAINIKQK |
3KGY Chain:A ((14-231)) | ---NLYFQGMSKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTG-------GETGPVNDMVRHTFER--TGAHIMGKRMFEGGERGWPEEAPFHTPVYVLTHERRN------PWVRPGGTTFYFVNDGPEQALALAREAA-------GERDIRISGGANVIQQYLNLGLVDELEIALIPVIFG-------------------GGRRLFENLHEPLPQFRIDRVLASPTATHLRYVRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57074 for 1452 contacts (39.3/contact) +
2D Compatibility (PS) -21384 + (NN) -2700 + (LL) 2896
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: 33336.0 ( 22.96 by residue)
QMean score : 0.175
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