Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MK-NLLCL---LALLLCTTVFAQPQ-QVVV-------GVSGNGYVTRQQDGARITQR--GVT-HWTNPKSIVSIYFYLHQPTTADLSLYAKGHSEIKVSYGKKGFKVNLQSNDFTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQKIKLLRQGKDVHIGEFGNEGS-------GGQSYLKYPWKAGNTYKFLM-----QIRPDGNGNTTYTA-------------YFYATDEKEWKLIASFLRP---KTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGKEPEIDWEALKQL |
| 1K0I Chain:A ((1-394)) | MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLM---EAREACGATTVYQA----AEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAE-RLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQV---PLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGR--LFLAGDAAHIVPPTG-AKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQ-------------TEL--EYYLGSEAGLATIAENYVGLPYEEIE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16870 for 2710 contacts (-6.2/contact) +
2D Compatibility (PS) -37542 + (NN) -12865 + (LL) 2812
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -76165.0 ( -28.11 by residue)
QMean score : 0.175
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