Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGPVAGNYVHDFTANGTSSSFYTI----------AGNLSTSKGTATY----NGKTLTQCLKMETATSISFTAPSAGKLTLVFAEAAATAKVDGNKVTASNGIITVDLAQGAHTITKADACNLFY-MEYAAHHHHHH
2LIO Chain:A ((1-136))
MKKEKIHLEYLLNATSKNILWSAISTPTGLEDWFADKVVSDDKTVTFCWGKTEQRQAGIVAIRAYSFIRFHWLDDENERDYFEIKMSYNELTGDYVLEITDFSEADEADDLKELWDSQVSKLRRTCGFLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2LIO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22887 for 709 contacts (-32.3/contact) +
2D Compatibility (PS) -12594 + (NN) 2240 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -37841.0 ( -53.37 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_2LIO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIO-query.scw
PDB file :
Tito_Scwrl_2LIO.pdb
: