Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFSKDEKNPIKRAL---QGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQ--LTMRLKEKGLKPGEKGATKQLRTLIQEILTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEE--NKGKLQKKLENPPEHYEKHEEIENILMPKPK |
| 3K9G Chain:A ((26-267)) | --------KPKIITIASIKGGVGKSTSAIILATLL------SKNNKVLLIDMDTQASITSYFYEKIEKLG----INFTKFNIYEILKEN-------VDIDSTIINVDNNLDLIPSYLTLHNFSEDKIEH--KDFLLKTSLGTLYYKYDYIVIDTNPSLD----VTLKNALLCSDYVIIPMTAEKWAVESLDLFNFFVRK------LNLFLPIFLIITRFKKNRTHKTLFEILKTKDRFLGTISENKDYIKEYENILEIFLKKI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12368 for 1723 contacts (7.2/contact) +
2D Compatibility (PS) -22847 + (NN) -944 + (LL) 2296
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -19127.0 ( -11.10 by residue)
QMean score : 0.114
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